Class/Object

org.apache.spark.ml.feature

RFormula

Related Docs: object RFormula | package feature

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class RFormula extends Estimator[RFormulaModel] with RFormulaBase with DefaultParamsWritable

:: Experimental :: Implements the transforms required for fitting a dataset against an R model formula. Currently we support a limited subset of the R operators, including '~', '.', ':', '+', and '-'. Also see the R formula docs here: http://stat.ethz.ch/R-manual/R-patched/library/stats/html/formula.html

The basic operators are:

Suppose a and b are double columns, we use the following simple examples to illustrate the effect of RFormula:

RFormula produces a vector column of features and a double or string column of label. Like when formulas are used in R for linear regression, string input columns will be one-hot encoded, and numeric columns will be cast to doubles. If the label column is of type string, it will be first transformed to double with StringIndexer. If the label column does not exist in the DataFrame, the output label column will be created from the specified response variable in the formula.

Annotations
@Experimental() @Since( "1.5.0" )
Source
RFormula.scala
Linear Supertypes
DefaultParamsWritable, MLWritable, RFormulaBase, HasLabelCol, HasFeaturesCol, Estimator[RFormulaModel], PipelineStage, Logging, Params, Serializable, Serializable, Identifiable, AnyRef, Any
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Inherited
  1. RFormula
  2. DefaultParamsWritable
  3. MLWritable
  4. RFormulaBase
  5. HasLabelCol
  6. HasFeaturesCol
  7. Estimator
  8. PipelineStage
  9. Logging
  10. Params
  11. Serializable
  12. Serializable
  13. Identifiable
  14. AnyRef
  15. Any
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Visibility
  1. Public
  2. All

Instance Constructors

  1. new RFormula()

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    Annotations
    @Since( "1.5.0" )
  2. new RFormula(uid: String)

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    Annotations
    @Since( "1.5.0" )

Value Members

  1. final def !=(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any
  2. final def ##(): Int

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    Definition Classes
    AnyRef → Any
  3. final def $[T](param: Param[T]): T

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    An alias for getOrDefault().

    An alias for getOrDefault().

    Attributes
    protected
    Definition Classes
    Params
  4. final def ==(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any
  5. final def asInstanceOf[T0]: T0

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    Definition Classes
    Any
  6. final def clear(param: Param[_]): RFormula.this.type

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    Clears the user-supplied value for the input param.

    Clears the user-supplied value for the input param.

    Definition Classes
    Params
  7. def clone(): AnyRef

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( ... )
  8. def copy(extra: ParamMap): RFormula

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    Creates a copy of this instance with the same UID and some extra params.

    Creates a copy of this instance with the same UID and some extra params. Subclasses should implement this method and set the return type properly. See defaultCopy().

    Definition Classes
    RFormulaEstimatorPipelineStageParams
    Annotations
    @Since( "1.5.0" )
  9. def copyValues[T <: Params](to: T, extra: ParamMap = ParamMap.empty): T

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    Copies param values from this instance to another instance for params shared by them.

    Copies param values from this instance to another instance for params shared by them.

    This handles default Params and explicitly set Params separately. Default Params are copied from and to defaultParamMap, and explicitly set Params are copied from and to paramMap. Warning: This implicitly assumes that this Params instance and the target instance share the same set of default Params.

    to

    the target instance, which should work with the same set of default Params as this source instance

    extra

    extra params to be copied to the target's paramMap

    returns

    the target instance with param values copied

    Attributes
    protected
    Definition Classes
    Params
  10. final def defaultCopy[T <: Params](extra: ParamMap): T

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    Default implementation of copy with extra params.

    Default implementation of copy with extra params. It tries to create a new instance with the same UID. Then it copies the embedded and extra parameters over and returns the new instance.

    Attributes
    protected
    Definition Classes
    Params
  11. final def eq(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef
  12. def equals(arg0: Any): Boolean

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    Definition Classes
    AnyRef → Any
  13. def explainParam(param: Param[_]): String

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    Explains a param.

    Explains a param.

    param

    input param, must belong to this instance.

    returns

    a string that contains the input param name, doc, and optionally its default value and the user-supplied value

    Definition Classes
    Params
  14. def explainParams(): String

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    Explains all params of this instance.

    Explains all params of this instance. See explainParam().

    Definition Classes
    Params
  15. final def extractParamMap(): ParamMap

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    extractParamMap with no extra values.

    extractParamMap with no extra values.

    Definition Classes
    Params
  16. final def extractParamMap(extra: ParamMap): ParamMap

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    Extracts the embedded default param values and user-supplied values, and then merges them with extra values from input into a flat param map, where the latter value is used if there exist conflicts, i.e., with ordering: default param values less than user-supplied values less than extra.

    Extracts the embedded default param values and user-supplied values, and then merges them with extra values from input into a flat param map, where the latter value is used if there exist conflicts, i.e., with ordering: default param values less than user-supplied values less than extra.

    Definition Classes
    Params
  17. final val featuresCol: Param[String]

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    Param for features column name.

    Param for features column name.

    Definition Classes
    HasFeaturesCol
  18. def finalize(): Unit

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    Attributes
    protected[java.lang]
    Definition Classes
    AnyRef
    Annotations
    @throws( classOf[java.lang.Throwable] )
  19. def fit(dataset: Dataset[_]): RFormulaModel

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    Fits a model to the input data.

    Fits a model to the input data.

    Definition Classes
    RFormulaEstimator
    Annotations
    @Since( "2.0.0" )
  20. def fit(dataset: Dataset[_], paramMaps: Array[ParamMap]): Seq[RFormulaModel]

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    Fits multiple models to the input data with multiple sets of parameters.

    Fits multiple models to the input data with multiple sets of parameters. The default implementation uses a for loop on each parameter map. Subclasses could override this to optimize multi-model training.

    dataset

    input dataset

    paramMaps

    An array of parameter maps. These values override any specified in this Estimator's embedded ParamMap.

    returns

    fitted models, matching the input parameter maps

    Definition Classes
    Estimator
    Annotations
    @Since( "2.0.0" )
  21. def fit(dataset: Dataset[_], paramMap: ParamMap): RFormulaModel

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    Fits a single model to the input data with provided parameter map.

    Fits a single model to the input data with provided parameter map.

    dataset

    input dataset

    paramMap

    Parameter map. These values override any specified in this Estimator's embedded ParamMap.

    returns

    fitted model

    Definition Classes
    Estimator
    Annotations
    @Since( "2.0.0" )
  22. def fit(dataset: Dataset[_], firstParamPair: ParamPair[_], otherParamPairs: ParamPair[_]*): RFormulaModel

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    Fits a single model to the input data with optional parameters.

    Fits a single model to the input data with optional parameters.

    dataset

    input dataset

    firstParamPair

    the first param pair, overrides embedded params

    otherParamPairs

    other param pairs. These values override any specified in this Estimator's embedded ParamMap.

    returns

    fitted model

    Definition Classes
    Estimator
    Annotations
    @Since( "2.0.0" ) @varargs()
  23. val formula: Param[String]

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    R formula parameter.

    R formula parameter. The formula is provided in string form.

    Annotations
    @Since( "1.5.0" )
  24. final def get[T](param: Param[T]): Option[T]

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    Optionally returns the user-supplied value of a param.

    Optionally returns the user-supplied value of a param.

    Definition Classes
    Params
  25. final def getClass(): Class[_]

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    Definition Classes
    AnyRef → Any
  26. final def getDefault[T](param: Param[T]): Option[T]

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    Gets the default value of a parameter.

    Gets the default value of a parameter.

    Definition Classes
    Params
  27. final def getFeaturesCol: String

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    Definition Classes
    HasFeaturesCol
  28. def getFormula: String

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    Annotations
    @Since( "1.5.0" )
  29. final def getLabelCol: String

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    Definition Classes
    HasLabelCol
  30. final def getOrDefault[T](param: Param[T]): T

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    Gets the value of a param in the embedded param map or its default value.

    Gets the value of a param in the embedded param map or its default value. Throws an exception if neither is set.

    Definition Classes
    Params
  31. def getParam(paramName: String): Param[Any]

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    Gets a param by its name.

    Gets a param by its name.

    Definition Classes
    Params
  32. final def hasDefault[T](param: Param[T]): Boolean

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    Tests whether the input param has a default value set.

    Tests whether the input param has a default value set.

    Definition Classes
    Params
  33. def hasLabelCol(schema: StructType): Boolean

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    Attributes
    protected
    Definition Classes
    RFormulaBase
  34. def hasParam(paramName: String): Boolean

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    Tests whether this instance contains a param with a given name.

    Tests whether this instance contains a param with a given name.

    Definition Classes
    Params
  35. def hashCode(): Int

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    Definition Classes
    AnyRef → Any
  36. def initializeLogIfNecessary(isInterpreter: Boolean): Unit

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    Attributes
    protected
    Definition Classes
    Logging
  37. final def isDefined(param: Param[_]): Boolean

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    Checks whether a param is explicitly set or has a default value.

    Checks whether a param is explicitly set or has a default value.

    Definition Classes
    Params
  38. final def isInstanceOf[T0]: Boolean

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    Definition Classes
    Any
  39. final def isSet(param: Param[_]): Boolean

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    Checks whether a param is explicitly set.

    Checks whether a param is explicitly set.

    Definition Classes
    Params
  40. def isTraceEnabled(): Boolean

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    Attributes
    protected
    Definition Classes
    Logging
  41. final val labelCol: Param[String]

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    Param for label column name.

    Param for label column name.

    Definition Classes
    HasLabelCol
  42. def log: Logger

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    Attributes
    protected
    Definition Classes
    Logging
  43. def logDebug(msg: ⇒ String, throwable: Throwable): Unit

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    Attributes
    protected
    Definition Classes
    Logging
  44. def logDebug(msg: ⇒ String): Unit

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    protected
    Definition Classes
    Logging
  45. def logError(msg: ⇒ String, throwable: Throwable): Unit

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    protected
    Definition Classes
    Logging
  46. def logError(msg: ⇒ String): Unit

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    protected
    Definition Classes
    Logging
  47. def logInfo(msg: ⇒ String, throwable: Throwable): Unit

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    protected
    Definition Classes
    Logging
  48. def logInfo(msg: ⇒ String): Unit

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    protected
    Definition Classes
    Logging
  49. def logName: String

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    protected
    Definition Classes
    Logging
  50. def logTrace(msg: ⇒ String, throwable: Throwable): Unit

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    protected
    Definition Classes
    Logging
  51. def logTrace(msg: ⇒ String): Unit

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    protected
    Definition Classes
    Logging
  52. def logWarning(msg: ⇒ String, throwable: Throwable): Unit

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    protected
    Definition Classes
    Logging
  53. def logWarning(msg: ⇒ String): Unit

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    protected
    Definition Classes
    Logging
  54. final def ne(arg0: AnyRef): Boolean

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    Definition Classes
    AnyRef
  55. final def notify(): Unit

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    Definition Classes
    AnyRef
  56. final def notifyAll(): Unit

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    Definition Classes
    AnyRef
  57. lazy val params: Array[Param[_]]

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    Returns all params sorted by their names.

    Returns all params sorted by their names. The default implementation uses Java reflection to list all public methods that have no arguments and return Param.

    Note: Developer should not use this method in constructor because we cannot guarantee that this variable gets initialized before other params.

    Definition Classes
    Params
  58. def save(path: String): Unit

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    Saves this ML instance to the input path, a shortcut of write.save(path).

    Saves this ML instance to the input path, a shortcut of write.save(path).

    Definition Classes
    MLWritable
    Annotations
    @Since( "1.6.0" ) @throws( ... )
  59. final def set(paramPair: ParamPair[_]): RFormula.this.type

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    Sets a parameter in the embedded param map.

    Sets a parameter in the embedded param map.

    Attributes
    protected
    Definition Classes
    Params
  60. final def set(param: String, value: Any): RFormula.this.type

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    Sets a parameter (by name) in the embedded param map.

    Sets a parameter (by name) in the embedded param map.

    Attributes
    protected
    Definition Classes
    Params
  61. final def set[T](param: Param[T], value: T): RFormula.this.type

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    Sets a parameter in the embedded param map.

    Sets a parameter in the embedded param map.

    Definition Classes
    Params
  62. final def setDefault(paramPairs: ParamPair[_]*): RFormula.this.type

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    Sets default values for a list of params.

    Sets default values for a list of params.

    Note: Java developers should use the single-parameter setDefault. Annotating this with varargs can cause compilation failures due to a Scala compiler bug. See SPARK-9268.

    paramPairs

    a list of param pairs that specify params and their default values to set respectively. Make sure that the params are initialized before this method gets called.

    Attributes
    protected
    Definition Classes
    Params
  63. final def setDefault[T](param: Param[T], value: T): RFormula.this.type

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    Sets a default value for a param.

    Sets a default value for a param.

    param

    param to set the default value. Make sure that this param is initialized before this method gets called.

    value

    the default value

    Attributes
    protected
    Definition Classes
    Params
  64. def setFeaturesCol(value: String): RFormula.this.type

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    Annotations
    @Since( "1.5.0" )
  65. def setFormula(value: String): RFormula.this.type

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    Sets the formula to use for this transformer.

    Sets the formula to use for this transformer. Must be called before use.

    value

    an R formula in string form (e.g. "y ~ x + z")

    Annotations
    @Since( "1.5.0" )
  66. def setLabelCol(value: String): RFormula.this.type

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    Annotations
    @Since( "1.5.0" )
  67. final def synchronized[T0](arg0: ⇒ T0): T0

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    Definition Classes
    AnyRef
  68. def toString(): String

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    Definition Classes
    RFormulaIdentifiable → AnyRef → Any
    Annotations
    @Since( "2.0.0" )
  69. def transformSchema(schema: StructType): StructType

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    :: DeveloperApi ::

    :: DeveloperApi ::

    Check transform validity and derive the output schema from the input schema.

    Typical implementation should first conduct verification on schema change and parameter validity, including complex parameter interaction checks.

    Definition Classes
    RFormulaPipelineStage
    Annotations
    @Since( "1.5.0" )
  70. def transformSchema(schema: StructType, logging: Boolean): StructType

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    :: DeveloperApi ::

    :: DeveloperApi ::

    Derives the output schema from the input schema and parameters, optionally with logging.

    This should be optimistic. If it is unclear whether the schema will be valid, then it should be assumed valid until proven otherwise.

    Attributes
    protected
    Definition Classes
    PipelineStage
    Annotations
    @DeveloperApi()
  71. val uid: String

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    An immutable unique ID for the object and its derivatives.

    An immutable unique ID for the object and its derivatives.

    Definition Classes
    RFormulaIdentifiable
    Annotations
    @Since( "1.5.0" )
  72. final def wait(): Unit

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    AnyRef
    Annotations
    @throws( ... )
  73. final def wait(arg0: Long, arg1: Int): Unit

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    AnyRef
    Annotations
    @throws( ... )
  74. final def wait(arg0: Long): Unit

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    AnyRef
    Annotations
    @throws( ... )
  75. def write: MLWriter

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    Returns an MLWriter instance for this ML instance.

    Returns an MLWriter instance for this ML instance.

    Definition Classes
    DefaultParamsWritableMLWritable

Deprecated Value Members

  1. def validateParams(): Unit

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    Validates parameter values stored internally.

    Validates parameter values stored internally. Raise an exception if any parameter value is invalid.

    This only needs to check for interactions between parameters. Parameter value checks which do not depend on other parameters are handled by Param.validate(). This method does not handle input/output column parameters; those are checked during schema validation.

    Definition Classes
    Params
    Annotations
    @deprecated
    Deprecated

    (Since version 2.0.0) Will be removed in 2.1.0. Checks should be merged into transformSchema.

Inherited from DefaultParamsWritable

Inherited from MLWritable

Inherited from RFormulaBase

Inherited from HasLabelCol

Inherited from HasFeaturesCol

Inherited from Estimator[RFormulaModel]

Inherited from PipelineStage

Inherited from Logging

Inherited from Params

Inherited from Serializable

Inherited from Serializable

Inherited from Identifiable

Inherited from AnyRef

Inherited from Any

Parameters

A list of (hyper-)parameter keys this algorithm can take. Users can set and get the parameter values through setters and getters, respectively.

Members

Parameter setters

Parameter getters